Global Mapper 25.0.2.111523 download the new version

Pairwise comparison of profile Hidden Markov models very sensitive Local and global search with profile Hidden Markov models, more sensitive than PSI-BLASTĭurbin R, Eddy SR, Krogh A, Mitchison G Genoogle uses indexing and parallel processing techniques for searching DNA and Proteins sequences.

Software for ultra fast local DNA sequence motif search and pairwise alignment for NGS data (FASTA, FASTQ). Global:Global (GG), Global:Local (GL) alignment with statistics Local search with fast k-tuple heuristic, slower but more sensitive than BLAST

GPU accelerated Smith Waterman algorithm for multiple shared-host GPUsīLASTX and BLASTP aligner based on double indexingīuchfink B, Xie C, Huson DH, Reuter K, Drost HG Position-specific iterative version CSI-BLAST more sensitive than PSI-BLAST Sequence-context specific BLAST, more sensitive than BLAST, FASTA, and SSEARCH. īurdyshaw CE, Sawyer S, Horton MD, Brook RG, Rekapalli B Distributed with the latest version of BLAST, this wrapper facilitates parallelization of the algorithm on modern hybrid architectures with many nodes and many cores within each node. NCBI compliant multinode and multicore BLAST wrapper. Local search with fast k-tuple heuristic (Basic Local Alignment Search Tool)Īltschul SF, Gish W, Miller W, Myers EW, Lipman DJ

See structural alignment software for structural alignment of proteins. This list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequence alignment.

Global Mapper 25.0.2.111523 download the new version